Package: Counternull 0.2.12

Counternull: Randomization-Based Inference

Randomization-Based Inference for customized experiments. Computes Fisher-Exact P-Values alongside null randomization distributions. Retrieves counternull sets and generates counternull distributions. Computes Fisher Intervals and Fisher-Adjusted P-Values. Package includes visualization of randomization distributions and Fisher Intervals. Users can input custom test statistics and their own methods for randomization. Rosenthal and Rubin (1994) <doi:10.1111/j.1467-9280.1994.tb00281.x>.

Authors:Mabene Yasmine [aut, cre], Bind Marie [aut], Harvard University [cph]

Counternull_0.2.12.tar.gz
Counternull_0.2.12.zip(r-4.7-any)Counternull_0.2.12.zip(r-4.6-any)Counternull_0.2.12.zip(r-4.5-any)
Counternull_0.2.12.tgz(r-4.6-any)Counternull_0.2.12.tgz(r-4.5-any)
Counternull_0.2.12.tar.gz(r-4.7-any)Counternull_0.2.12.tar.gz(r-4.6-any)
Counternull_0.2.12.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
Counternull/json (API)

# Install 'Counternull' in R:

install.packages('Counternull', repos = c('https://ymabene.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ymabene/counternull/issues

Datasets:

sample_data - Sample Data
sample_matrix - Sample Randomization Matrix

On CRAN:

3.70 score 1 stars 6 scripts 367 downloads 6 exports 32 dependencies

Last updated from:519830b185. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel	OK	158
source / vignettes	OK	214
linux-release	OK	147
macos-release	OK	139
macos-oldrel	OK	205
windows-devel	OK	95
windows-release	OK	86
windows-oldrel	OK	89
wasm-release	OK	136

Exports:adjust_pvalues create_fisher_interval create_null_rand create_randomization_matrix find_counternull_values find_test_stat

Dependencies:cli cpp11 dplyr effsize farver generics ggplot2 glue gtable isoband labeling lifecycle magrittr pillar pkgconfig purrr R6 randomizr RColorBrewer Rcpp rlang S7 scales stringi stringr tibble tidyr tidyselect utf8 vctrs viridisLite withr

Randomization-Based Inference Using Counternull

Rendered fromcounternull_vignette.Rmdusingknitr::rmarkdown

Last update: 2023-08-27
Started: 2023-08-27

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Compute Fisher-Adjusted P-Values for Multiple Testing	adjust_pvalues
Compute Fisher Interval	create_fisher_interval
Create Null Randomization Distribution	create_null_rand
Create Randomization Matrix	create_randomization_matrix
Find Counternull Values	find_counternull_values
Calculate Observed Test Statistic	find_test_stat
Sample Data	sample_data
Sample Randomization Matrix	sample_matrix